WormBase Tree Display for Gene: WBGene00093890
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| WBGene00093890 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-set-4 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA04336 | ||||||||
| Molecular_name | PPA04336 | ||||||||
| PPA04336.1 | |||||||||
| PP61376 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000060759 | ||||||||
| UMM-S10-21.21 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-set-4 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | set | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Histone-lysine N-methyltransferase, N-terminal domain; Histone-lysine N-methyltransferase Suv4-20/Set9; and SET domain. Is an ortholog of C. elegans set-4. In C. elegans, set-4 is involved in determination of adult lifespan. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA04336 | |||||||
| Corresponding_transcript | PPA04336.1 | ||||||||
| Other_sequence (13) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_1917 | |||||||
| GPL14372_Probes_1918 | |||||||||
| GPL14372_Probes_1919 | |||||||||
| GPL14372_Probes_1920 | |||||||||
| Method | Gene |
