WormBase Tree Display for Gene: WBGene00094008
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| WBGene00094008 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-gcy-22 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA04454 | ||||||||
| Molecular_name | PPA04454 | ||||||||
| PPA04454.1 | |||||||||
| PP71845 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000060874 | ||||||||
| GENEPREDICTION_SNAP300000060878 | |||||||||
| GENEPREDICTION_SNAP300000063543 | |||||||||
| GENEPREDICTION_SNAP300000063544 | |||||||||
| UMM-S2838-11.61 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-gcy-22 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00094012 | ||||
| 3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00095623 | ||||
| 4 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00095624 | ||||
| 5 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-gcy-22 | ||||
| Acquires_merge | WBGene00095623 | ||||||||
| WBGene00094012 | |||||||||
| WBGene00095624 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gcy | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00175303 | ||||||||
| 00175304 | |||||||||
| 00175305 | |||||||||
| 00175306 | |||||||||
| 00175307 | |||||||||
| 00175308 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable guanylate cyclase activity and protein kinase activity. Predicted to be involved in cGMP biosynthetic process and intracellular signal transduction. Is an ortholog of C. elegans gcy-22. In C. elegans, gcy-22 is involved in several processes, including positive regulation of calcium-mediated signaling; response to metal ion; and response to methionine. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA04454 | |||||||
| Corresponding_transcript | PPA04454.1 | ||||||||
| Other_sequence (39) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_5086 | |||||||
| GPL14372_Probes_45752 | |||||||||
| GPL14372_Probes_45753 | |||||||||
| Method | Gene |
