WormBase Tree Display for Gene: WBGene00094278
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| WBGene00094278 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | CGC_name | Ppa-col-65 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA04724 | ||||||||
| Molecular_name | PPA04724 | ||||||||
| PPA04724.1 | |||||||||
| PP03701 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000061142 | ||||||||
| UMM-S273-1.13 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-col-65 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 08 May 2019 10:09:27 | WBPerson1983 | Name_change | CGC_name | Ppa-col-65.1 | ||||
| 3 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Ppa-col-65.1 | ||||
| 5 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-col-65 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
| GO_annotation | 00175347 | ||||||||
| Ortholog (59) | |||||||||
| Paralog (148) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-65. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA04724 | |||||||
| Corresponding_transcript | PPA04724.1 | ||||||||
| Other_sequence | EX014670.1 | ||||||||
| JI246039.1 | |||||||||
| JI174088.1 | |||||||||
| EX909967.1 | |||||||||
| BU586918.1 | |||||||||
| JI216649.1 | |||||||||
| PPC17785_1 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_79212 | |||||||
| Expression_cluster | WBPaper00061743:ppa-eud-1(tu1069)_regulated | ||||||||
| WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Up | |||||||||
| Remark | [191001 pad] The CGC name Ppa-col-65.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-col-65.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
