WormBase Tree Display for Gene: WBGene00094292

WBGene00094292 SMap: S_parent: Sequence: PPA_ChrII
  Identity: Version: 3
    Name: CGC_name: Ppa-cup-5 From_analysis: Inferred_from_orthology
      Sequence_name: PPA04738
      Molecular_name: PPA04738a
        PPA04738a.1
        PP75428
        PPA04738b
        PP74956
        PPA04738b.1
      Other_name: GENEPREDICTION_SNAP300000061156
        UMM-S273-2.41 Person_evidence: WBPerson606
      Public_name: Ppa-cup-5
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:04 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00202920
        3 24 Nov 2017 09:46:52 WBPerson4055 Event: Acquires_merge: WBGene00203080
      Acquires_merge: WBGene00202920
        WBGene00203080
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cup
    RNASeq_FPKM: WBls:0000032 0 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
            RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00175352
    Ortholog (40)
    Structured_description: Automated_description: Predicted to enable monoatomic cation channel activity. Is an ortholog of C. elegans cup-5. In C. elegans, cup-5 is involved in several processes, including cuticle development involved in collagen and cuticulin-based cuticle molting cycle; determination of adult lifespan; and lysosomal lumen acidification. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA04738a
      PPA04738b
    Corresponding_CDS_history: PPA04738:pp270
      PPA04738:pp273
    Corresponding_transcript: PPA04738a.1
      PPA04738b.1
    Other_sequence (20)
  Experimental_info: Microarray_results: GPL14372_Probes_25273
      GPL14372_Probes_25274
      GPL14372_Probes_25275
      GPL14372_Probes_25276
  Method: Gene