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WormBase Tree Display for Gene: WBGene00094432

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Name Class

WBGene00094432SMapS_parentSequencePPA_ChrV
IdentityVersion2
NameCGC_namePpa-vps-4From_analysisInferred_from_orthology
Sequence_namePPA04878
Molecular_namePPA04878
PPA04878.1
PP73440
Other_nameGENEPREDICTION_SNAP300000062343
GENEPREDICTION_SNAP300000062346
UMM-S311-2.41Person_evidenceWBPerson606
Public_namePpa-vps-4
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:48WBPerson4055EventAcquires_mergeWBGene00094435
Acquires_mergeWBGene00094435
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classvps
RNASeq_FPKMWBls:00000323.03711From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.20808From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
3.03711From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
3.58712From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00175383
00175384
Ortholog (35)
ParalogWBGene00305042Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00306030Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and ATP hydrolysis activity. Is an ortholog of C. elegans vps-4. In C. elegans, vps-4 is involved in mechanosensory behavior and protein localization to postsynaptic membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA04878
Corresponding_transcriptPPA04878.1
Other_sequence (64)
Experimental_infoMicroarray_resultsGPL14372_Probes_26887
GPL14372_Probes_26888
GPL14372_Probes_26890
GPL14372_Probes_81769
GPL14372_Probes_81770
MethodGene