WormBase Tree Display for Gene: WBGene00094856
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| WBGene00094856 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | Sequence_name | PPA05302 | |||||||
| Molecular_name | PPA05302 | ||||||||
| PPA05302.1 | |||||||||
| PP68061 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000061765 | ||||||||
| GENEPREDICTION_SNAP300000061766 | |||||||||
| Ppa-tag-130 | |||||||||
| GENEPREDICTION_SNAP300000061769 | |||||||||
| UMM-S429-2.123 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA05302 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-inx-1 | ||||
| 3 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00094857 | ||||
| 4 | 24 Nov 2017 09:46:48 | WBPerson4055 | Event | Acquires_merge | WBGene00094860 | ||||
| 5 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| 6 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-chup-1 | ||||
| 7 | 04 Feb 2020 15:43:57 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00094857 | ||||||||
| WBGene00094860 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 11.1257 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 11.1257 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 14.0144 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 8.38003 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00175613 | ||||||||
| Ortholog (42) | |||||||||
| Paralog (29) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of C. elegans F33C8.4 and chup-1. In C. elegans, chup-1 is involved in cholesterol import. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA05302 | |||||||
| Corresponding_transcript | PPA05302.1 | ||||||||
| Other_sequence (71) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_44254 | |||||||
| GPL14372_Probes_44255 | |||||||||
| GPL14372_Probes_44256 | |||||||||
| GPL14372_Probes_44257 | |||||||||
| GPL14372_Probes_44258 | |||||||||
| GPL14372_Probes_44259 | |||||||||
| GPL14372_Probes_44264 | |||||||||
| GPL14372_Probes_44265 | |||||||||
| GPL14372_Probes_44267 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Remark | [180319 gw3] The CGC name Ppa-inx-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| [200204 pad] The CGC name Ppa-chup-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
