WormBase Tree Display for Gene: WBGene00095029
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| WBGene00095029 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-pash-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA05475 | ||||||||
| Molecular_name | PPA05475 | ||||||||
| PPA05475.1 | |||||||||
| PP53929 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000061937 | ||||||||
| UMM-S60-13.16 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-pash-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pash | ||||||||
| RNASeq_FPKM | WBls:0000032 | 1.80793 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.602643 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00175701 | ||||||||
| 00175702 | |||||||||
| 00175703 | |||||||||
| 00175704 | |||||||||
| 00175705 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00116296 | Pristionchus pacificus | From_analysis | Inparanoid_8 | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity; heme binding activity; and identical protein binding activity. Predicted to be involved in primary miRNA processing. Predicted to be part of microprocessor complex. Is an ortholog of C. elegans pash-1. In C. elegans, pash-1 is involved in primary miRNA processing and regulation of developmental process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA05475 | |||||||
| Corresponding_transcript | PPA05475.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_76888 | |||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| Method | Gene |
