WormBase Tree Display for Gene: WBGene00095510
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| WBGene00095510 | SMap | S_parent | Sequence | PPA_ChrIV | ||
|---|---|---|---|---|---|---|
| Identity | Version | 11 | ||||
| Name | Sequence_name | PPA05956 | ||||
| Molecular_name | PPA05956 | |||||
| PPA05956.1 | ||||||
| PP75049 | ||||||
| Other_name | GENEPREDICTION_SNAP300000063430 | |||||
| GENEPREDICTION_SNAP300000063431 | ||||||
| GENEPREDICTION_SNAP300000063432 | ||||||
| GENEPREDICTION_SNAP300000063433 | ||||||
| GENEPREDICTION_SNAP300000073401 | ||||||
| UMM-S2838-15.94 | Person_evidence | WBPerson606 | ||||
| Public_name | PPA05956 | |||||
| Species | Pristionchus pacificus | |||||
| History | Version_change (11) | |||||
| Acquires_merge | WBGene00095511 | |||||
| WBGene00095512 | ||||||
| WBGene00095513 | ||||||
| WBGene00106230 | ||||||
| Split_into | WBGene00304884 | |||||
| WBGene00304885 | ||||||
| WBGene00304887 | ||||||
| WBGene00304886 | ||||||
| Status | Live | |||||
| Gene_info | Biotype | SO:0001217 | ||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
| RNASeq.pristionchus.WBls:0000032.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
| WBls:0000101 | 1.1534 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
| 3.4602 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
| RNASeq.pristionchus.WBls:0000101.control_median | ||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
| Ortholog (71) | ||||||
| Paralog (25) | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Uncharacterised oxidoreductase Dhs-27; Uncharacterized oxidoreductase dhs-27; CHK kinase-like; and Protein kinase-like domain superfamily. Is an ortholog of C. elegans mag-1; T16G1.6; and T16G1.4. In C. elegans, mag-1 is involved in feminization of hermaphroditic germ-line; nuclear mRNA surveillance; and positive regulation of reproductive process. | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | PPA05956 | ||||
| Corresponding_CDS_history | PPA05956:pp272 | |||||
| Corresponding_transcript | PPA05956.1 | |||||
| Other_sequence | CRC04923_1 | |||||
| Experimental_info | Microarray_results | GPL14372_Probes_45436 | ||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | |||||
| WBPaper00041606:PP_X.nematophila_regulated | ||||||
| Remark | [180319 gw3] The CGC name Ppa-mag-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | |||
| Method | Gene |
