WormBase Tree Display for Gene: WBGene00096244
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| WBGene00096244 | SMap | S_parent | Sequence | PPA_ChrV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 9 | |||||||
| Name | CGC_name | Ppa-ocrl-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA06690 | ||||||||
| Molecular_name | PPA06690 | ||||||||
| PPA06690.1 | |||||||||
| PP64928 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000063052 | ||||||||
| GENEPREDICTION_SNAP300000063053 | |||||||||
| GENEPREDICTION_SNAP300000063054 | |||||||||
| GENEPREDICTION_SNAP300000083205 | |||||||||
| UMM-S397-0.8 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-ocrl-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:46 | WBPerson2970 | Name_change | CGC_name | Ppa-ocrl-1 | ||||
| 3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00096245 | ||||
| 4 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00096246 | ||||
| 5 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00115911 | ||||
| 6 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-ocrl-1 | ||||
| 8 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 9 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-ocrl-1 | ||||
| Acquires_merge | WBGene00115911 | ||||||||
| WBGene00096246 | |||||||||
| WBGene00096245 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ocrl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 30.1803 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 28.0855 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 30.1803 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 54.0762 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00176348 | ||||||||
| 00176349 | |||||||||
| 00176350 | |||||||||
| 00176351 | |||||||||
| 00176352 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00095235 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00096025 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00098080 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00106661 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00272030 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00305197 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity and phosphatase activity. Predicted to be involved in phosphatidylinositol dephosphorylation and signal transduction. Is an ortholog of C. elegans ocrl-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA06690 | |||||||
| Corresponding_transcript | PPA06690.1 | ||||||||
| Other_sequence (47) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_32829 | |||||||
| GPL14372_Probes_89861 | |||||||||
| GPL14372_Probes_89862 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-ocrl-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-ocrl-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
