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WormBase Tree Display for Gene: WBGene00096533

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Name Class

WBGene00096533SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameCGC_namePpa-nhr-14
Sequence_namePPA06979
Molecular_namePPA06979
PPA06979.1
PP72077
Other_nameGENEPREDICTION_SNAP300000064366
UMM-S139-24.20Person_evidenceWBPerson606
Public_namePpa-nhr-14
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
218 Nov 2010 11:54:48WBPerson2970Name_changeCGC_namePpa-nhr-14
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnhr
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00176518
00176519
00176520
00176521
Ortholog (29)
Paralog (62)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-14. In C. elegans, nhr-14 is involved in defense response to Gram-negative bacterium; negative regulation of protein localization to nucleus; and regulation of innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA06979
Corresponding_transcriptPPA06979.1
Other_sequence (16)
Experimental_infoMicroarray_resultsGPL14372_Probes_54398
GPL14372_Probes_54399
GPL14372_Probes_54400
GPL14372_Probes_54401
GPL14372_Probes_54402
GPL14372_Probes_54404
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
MethodGene