WormBase Tree Display for Gene: WBGene00096533
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WBGene00096533 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | Ppa-nhr-14 | |||||||
Sequence_name | PPA06979 | ||||||||
Molecular_name | PPA06979 | ||||||||
PPA06979.1 | |||||||||
PP72077 | |||||||||
Other_name | GENEPREDICTION_SNAP300000064366 | ||||||||
UMM-S139-24.20 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-nhr-14 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 18 Nov 2010 11:54:48 | WBPerson2970 | Name_change | CGC_name | Ppa-nhr-14 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | nhr | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
GO_annotation | 00176518 | ||||||||
00176519 | |||||||||
00176520 | |||||||||
00176521 | |||||||||
Ortholog (29) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-14. In C. elegans, nhr-14 is involved in defense response to Gram-negative bacterium; negative regulation of protein localization to nucleus; and regulation of innate immune response. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA06979 | |||||||
Corresponding_transcript | PPA06979.1 | ||||||||
Other_sequence (16) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_54398 | |||||||
GPL14372_Probes_54399 | |||||||||
GPL14372_Probes_54400 | |||||||||
GPL14372_Probes_54401 | |||||||||
GPL14372_Probes_54402 | |||||||||
GPL14372_Probes_54404 | |||||||||
Expression_cluster | WBPaper00041606:PP_X.nematophila_regulated | ||||||||
Method | Gene |