WormBase Tree Display for Gene: WBGene00096534
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| WBGene00096534 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | CGC_name | Ppa-nhr-35 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA06980 | ||||||||
| Molecular_name | PPA06980 | ||||||||
| PPA06980.1 | |||||||||
| PP60378 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000064367 | ||||||||
| GENEPREDICTION_SNAP300000079188 | |||||||||
| UMM-S196-12.13 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-nhr-35 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 13:24:32 | WBPerson2970 | Name_change | CGC_name | removed | ||||
| 3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00111997 | ||||
| 4 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-nhr-35 | ||||
| 5 | 08 Feb 2019 15:42:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-nhr-35 | ||||
| 7 | 28 May 2021 19:05:20 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 8 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-nhr-35 | ||||
| Acquires_merge | WBGene00111997 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.715327 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 2.14598 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00176522 | ||||||||
| 00176523 | |||||||||
| 00176524 | |||||||||
| 00176525 | |||||||||
| 00176526 | |||||||||
| 00176527 | |||||||||
| 00176528 | |||||||||
| Ortholog (33) | |||||||||
| Paralog (63) | |||||||||
| Structured_description | Automated_description | Predicted to enable several functions, including DNA-binding transcription factor activity; nuclear steroid receptor activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Is an ortholog of C. elegans nhr-35. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA06980 | |||||||
| Corresponding_transcript | PPA06980.1 | ||||||||
| Other_sequence (21) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_6972 | |||||||
| GPL14372_Probes_6974 | |||||||||
| GPL14372_Probes_51203 | |||||||||
| GPL14372_Probes_51207 | |||||||||
| GPL14372_Probes_51208 | |||||||||
| Remark | PPA06980 replaces Ppa-nhr-14 as Public_name | Curator_confirmed | WBPerson2970 | ||||||
| [190208 pad] The CGC name Ppa-nhr-35 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| [210528 pad] The CGC name Ppa-nhr-35 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
