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WormBase Tree Display for Gene: WBGene00096875

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Name Class

WBGene00096875SMapS_parentSequencePPA_ChrI
IdentityVersion3
NameSequence_namePPA07321
Molecular_namePPA07321
PPA07321.1
PP58354
Other_nameGENEPREDICTION_SNAP300000063800
GENEPREDICTION_SNAP300000063801
UMM-S7-69.17Person_evidenceWBPerson606
Public_namePPA07321
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00096876
324 Nov 2017 09:46:52WBPerson4055EventAcquires_mergeWBGene00206251
Acquires_mergeWBGene00096876
WBGene00206251
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.05834From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
3.17502From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
ParalogWBGene00204137Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00204452Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00205219Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274102Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00274569Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276546Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in intestine based on RNA-seq studies. Is predicted to encode a protein with the following domain: C6 domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA07321
Corresponding_transcriptPPA07321.1
Experimental_infoMicroarray_resultsGPL14372_Probes_13138
GPL14372_Probes_13140
GPL14372_Probes_13141
GPL14372_Probes_13142
GPL14372_Probes_60003
GPL14372_Probes_60004
GPL14372_Probes_60005
Expression_clusterWBPaper00041472:Phosphorylated_protein
WBPaper00049334:PE_intestine_enriched
WBPaper00050265:C.albidus_vs_OP50_downregulated
WBPaper00050265:C.albidus_vs_OP50_upregulated
WBPaper00050265:C.curvatus_vs_OP50_downregulated
WBPaper00050265:C.curvatus_vs_OP50_upregulated
MethodGene