WormBase Tree Display for Gene: WBGene00096891
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| WBGene00096891 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-lin-12 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA07337 | ||||||||
| Molecular_name | PPA07337 | ||||||||
| PPA07337.1 | |||||||||
| PP74174 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000063816 | ||||||||
| GENEPREDICTION_SNAP300000063817 | |||||||||
| GENEPREDICTION_SNAP300000082209 | |||||||||
| GENEPREDICTION_SNAP300000085293 | |||||||||
| UMM-S7-71.16 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-lin-12 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00096892 | ||||
| 3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00115111 | ||||
| 4 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00118149 | ||||
| 5 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-lin-12 | ||||
| Acquires_merge | WBGene00096892 | ||||||||
| WBGene00115111 | |||||||||
| WBGene00118149 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lin | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.39114 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 1.17342 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| GO_annotation | 00176695 | ||||||||
| 00176696 | |||||||||
| 00176697 | |||||||||
| 00176698 | |||||||||
| 00176699 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00095068 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00097973 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00098476 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00107839 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00273291 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00273425 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00275663 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be involved in Notch signaling pathway and cell differentiation. Predicted to be located in membrane. Is an ortholog of C. elegans lin-12. In C. elegans, lin-12 is involved in several processes, including egg-laying behavior; nematode larval development; and positive regulation of mesodermal cell fate specification. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA07337 | |||||||
| Corresponding_transcript | PPA07337.1 | ||||||||
| Other_sequence | JI164309.1 | ||||||||
| Method | Gene |
