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WormBase Tree Display for Gene: WBGene00096989

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Name Class

WBGene00096989SMapS_parentSequencePPA_ChrV
Identity (5)
Gene_infoBiotypeSO:0001217
Gene_classtax
RNASeq_FPKMWBls:00000321.22134From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.407113From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00176735
00176736
00176737
00176738
Ortholog (31)
ParalogWBGene00089789Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091942Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102397Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278424Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278727Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable monoatomic ion channel activity. Predicted to be involved in monoatomic ion transport and transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans tax-2. In C. elegans, tax-2 is involved in several processes, including G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger; negative regulation of cGMP-mediated signaling; and positive regulation of macromolecule biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA07435
Corresponding_transcriptPPA07435.1
Other_sequence (23)
Experimental_infoMicroarray_resultsGPL14372_Probes_11167
GPL14372_Probes_11168
GPL14372_Probes_11169
GPL14372_Probes_11170
GPL14372_Probes_11171
GPL14372_Probes_11172
GPL14372_Probes_11173
GPL14372_Probes_56589
GPL14372_Probes_56590
GPL14372_Probes_56591
ReferenceWBPaper00061879
Remark[190208 pad] The CGC name Ppa-tax-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-tax-2 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene