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WormBase Tree Display for Gene: WBGene00097890

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Name Class

WBGene00097890SMapS_parentSequencePPA_ChrI
IdentityVersion9
NameSequence_namePPA08336
Molecular_namePPA08336
PPA08336.1
PP55884
Other_nameGENEPREDICTION_SNAP300000064816
GENEPREDICTION_SNAP300000064817
GENEPREDICTION_SNAP300000071208
UMM-S7-66.6Person_evidenceWBPerson606
Public_namePPA08336
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00097891
324 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00104020
420 Mar 2018 10:26:13WBPerson4025Name_changeCGC_namePpa-jhdm-1.1
508 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
627 Nov 2019 12:48:14WBPerson1983Name_changeCGC_namePpa-jhdm-1.3
704 Feb 2020 15:43:57WBPerson1983Name_changeCGC_nameRemoved
804 Jun 2020 14:38:21WBPerson1983Name_changeCGC_namePpa-jhdm-1
928 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
Acquires_mergeWBGene00097891
WBGene00104020
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010.397747From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
1.19324From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
OrthologWBGene00055492Caenorhabditis remaneiFrom_analysisInparanoid_8
Pan_g7671Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g7796Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00259601Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267931Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289401Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00090738Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00099854Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00105462Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109130Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00109372Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115140Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280973Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: JmjC domain, hydroxylase and JmjC domain.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA08336
Corresponding_transcriptPPA08336.1
Other_sequenceJI464094.1
Experimental_infoMicroarray_resultsGPL14372_Probes_8820
GPL14372_Probes_8821
GPL14372_Probes_8822
GPL14372_Probes_8823
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
Remark[190208 pad] The CGC name Ppa-jhdm-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[200204 pad] The CGC name Ppa-jhdm-1.3 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-jhdm-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene