WormBase Tree Display for Gene: WBGene00098343
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| WBGene00098343 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 8 | |||||||
| Name | CGC_name | Ppa-kcnl-3 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA08789 | ||||||||
| Molecular_name | PPA08789 | ||||||||
| PPA08789.1 | |||||||||
| PP55906 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000066056 | ||||||||
| GENEPREDICTION_SNAP300000066058 | |||||||||
| UMM-S7-94.22 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-kcnl-3 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00098345 | ||||
| 3 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00202628 | ||||
| 4 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-kcnl-3 | ||||
| 5 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 6 | 08 May 2019 10:09:23 | WBPerson1983 | Name_change | CGC_name | Ppa-kcnl-3 | ||||
| 7 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 8 | 28 Jul 2021 11:12:27 | WBPerson1983 | Name_change | CGC_name | Ppa-kcnl-3 | ||||
| Acquires_merge | WBGene00098345 | ||||||||
| WBGene00202628 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | kcnl | ||||||||
| RNASeq_FPKM | WBls:0000032 | 5.01142 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.67047 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00177334 | ||||||||
| 00177335 | |||||||||
| 00177336 | |||||||||
| 00177337 | |||||||||
| 00177338 | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00204020 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00205190 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable calmodulin binding activity and small conductance calcium-activated potassium channel activity. Predicted to be involved in potassium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans kcnl-3. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA08789 | |||||||
| Corresponding_transcript | PPA08789.1 | ||||||||
| Other_sequence (26) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_21620 | |||||||
| GPL14372_Probes_21623 | |||||||||
| GPL14372_Probes_74273 | |||||||||
| GPL14372_Probes_74274 | |||||||||
| GPL14372_Probes_74276 | |||||||||
| GPL14372_Probes_74277 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-kcnl-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-kcnl-3 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
