WormBase Tree Display for Gene: WBGene00098375
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| WBGene00098375 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | Sequence_name | PPA08821 | |||||||
| Molecular_name | PPA08821 | ||||||||
| PPA08821.1 | |||||||||
| PP70359 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000066088 | ||||||||
| UMM-S7-96.12 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA08821 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Ppa-asm-2.2 | ||||
| 3 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 4 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-asm-2.2 | ||||
| 5 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 5.4035 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 2.86482 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 3.19096 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00177341 | ||||||||
| 00177342 | |||||||||
| 00177343 | |||||||||
| 00177344 | |||||||||
| Ortholog (33) | |||||||||
| Paralog (123) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans asm-2 and hizr-1. In C. elegans, asm-2 is involved in ceramide biosynthetic process and sphingomyelin catabolic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA08821 | |||||||
| Corresponding_transcript | PPA08821.1 | ||||||||
| Other_sequence (14) | |||||||||
| Remark | [190507 pad] The CGC name Ppa-asm-2.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210728 pad] The CGC name Ppa-asm-2.2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
