WormBase Tree Display for Gene: WBGene00099070
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| WBGene00099070 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | Ppa-npp-22 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA09516 | ||||||||
| Molecular_name | PPA09516 | ||||||||
| PPA09516.1 | |||||||||
| PP72271 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000066718 | ||||||||
| GENEPREDICTION_SNAP300000066720 | |||||||||
| UMM-S2844-35.41 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-npp-22 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-npp-22 | ||||
| 3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00099072 | ||||
| 4 | 04 Jun 2020 14:38:22 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-npp-22 | ||||
| Acquires_merge | WBGene00099072 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | npp | ||||||||
| RNASeq_FPKM | WBls:0000032 | 11.2367 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.3806 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 11.2367 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 19.9052 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: PapD-like superfamily; Nucleoporin protein Ndc1-Nup; Major sperm protein (MSP) domain; Immunoglobulin-like fold; and MSP (Major sperm protein) domain. Is an ortholog of C. elegans npp-22. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA09516 | |||||||
| Corresponding_transcript | PPA09516.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_33287 | |||||||
| GPL14372_Probes_90967 | |||||||||
| GPL14372_Probes_90969 | |||||||||
| GPL14372_Probes_90970 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| Remark | [200603 pad] The CGC name Ppa-npp-22 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| Method | Gene |
