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WormBase Tree Display for Gene: WBGene00099506

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Name Class

WBGene00099506SMapS_parentSequencePPA_ChrII
IdentityVersion6
NameCGC_namePpa-cpt-1From_analysisInferred_from_orthology
Sequence_namePPA09952
Molecular_namePPA09952
PPA09952.1
PP61455
Other_nameGENEPREDICTION_SNAP300000066485
GENEPREDICTION_SNAP300000066489
UMM-S10-23.12Person_evidenceWBPerson606
Public_namePpa-cpt-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:04WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00099510
308 Feb 2019 15:42:29WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:25WBPerson1983Name_changeCGC_namePpa-cpt-1
528 May 2021 19:05:21WBPerson1983Name_changeCGC_nameRemoved
628 Jul 2021 11:12:28WBPerson1983Name_changeCGC_namePpa-cpt-1
Acquires_mergeWBGene00099510
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcpt
RNASeq_FPKMWBls:00000322.04352From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001012.04352From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
3.09439From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
7.23965From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00177865
Ortholog (43)
ParalogWBGene00089713Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00091480Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00101190Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00103700Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115977Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00117957Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281276Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable acyltransferase activity. Is an ortholog of C. elegans cpt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA09952
Corresponding_transcriptPPA09952.1
Other_sequence (107)
Experimental_infoMicroarray_results (12)
Expression_clusterWBPaper00041207:PP_dauer_up
Remark[190208 pad] The CGC name Ppa-cpt-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-cpt-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene