WormBase Tree Display for Gene: WBGene00100013
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WBGene00100013 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | Ppa-utx-1 | Inferred_automatically | from gene merge | |||||
Sequence_name | PPA10459 | ||||||||
Molecular_name | PPA10459 | ||||||||
PPA10459.1 | |||||||||
PP63374 | |||||||||
Other_name | GENEPREDICTION_SNAP300000066993 | ||||||||
GENEPREDICTION_SNAP300000066994 | |||||||||
UMM-S207-24.127 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-utx-1 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-utx-1 | ||||
3 | 24 Nov 2017 09:46:49 | WBPerson4055 | Event | Acquires_merge | WBGene00100014 | ||||
Acquires_merge | WBGene00100014 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | utx | ||||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||||
Ortholog (19) | |||||||||
Paralog | WBGene00094266 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
WBGene00097259 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00109758 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00277446 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00278074 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Tetratricopeptide repeat; Tetratricopeptide repeat 2; JmjC domain; Tetratricopeptide-like helical domain superfamily; and JmjC domain, hydroxylase. Is an ortholog of C. elegans utx-1. In C. elegans, utx-1 is involved in cell fate specification and programmed cell death. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA10459 | |||||||
Corresponding_transcript | PPA10459.1 | ||||||||
Other_sequence (26) | |||||||||
Experimental_info | Expression_cluster | WBPaper00041472:Phosphorylated_protein | |||||||
Method | Gene |