WormBase Tree Display for Gene: WBGene00100340
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WBGene00100340 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | Sequence_name | PPA10786 | |||||||
Molecular_name | PPA10786 | ||||||||
PPA10786.1 | |||||||||
PP73134 | |||||||||
Other_name | GENEPREDICTION_SNAP300000071846 | ||||||||
UMM-S2840-4.42 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA10786 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-nhr-173 | ||||
3 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 6.70877 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 15.8512 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
6.70877 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
7.51999 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
GO_annotation | 00178134 | ||||||||
00178135 | |||||||||
00178136 | |||||||||
00178137 | |||||||||
Ortholog (80) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-173. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA10786 | |||||||
Corresponding_transcript | PPA10786.1 | ||||||||
Experimental_info | Microarray_results (4) | ||||||||
Remark | [190208 pad] The CGC name Ppa-nhr-173 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
Method | Gene |