WormBase Tree Display for Gene: WBGene00100522
expand all nodes | collapse all nodes | view schema
| WBGene00100522 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA10968 | |||||||
| Molecular_name | PPA10968 | ||||||||
| PPA10968.1 | |||||||||
| PP39347 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000072028 | ||||||||
| UMM-S2840-44.43 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA10968 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:04 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:46 | WBPerson2970 | Name_change | CGC_name | Ppa-nlt-1 | ||||
| 3 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 22.4966 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 7.49887 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00097348 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00279120 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: SCP2 sterol-binding domain; Lipid-binding protein POX18/UbiT/NSL-TP1; SCP-2 sterol transfer family; and SCP2 sterol-binding domain superfamily. Is an ortholog of C. elegans nlt-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA10968 | |||||||
| Corresponding_transcript | PPA10968.1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_61041 | |||||||
| GPL14372_Probes_61042 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-nlt-1 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00097348 | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
