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WormBase Tree Display for Gene: WBGene00101230

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Name Class

WBGene00101230SMapS_parentSequencePPA_ChrIV
IdentityVersion2
NameSequence_namePPA11676
Molecular_namePPA11676
PPA11676.1
PP53544
Other_nameGENEPREDICTION_SNAP300000068617
GENEPREDICTION_SNAP300000068620
UMM-S336-6.41Person_evidenceWBPerson606
Public_namePPA11676
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00101233
Acquires_mergeWBGene00101233
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000325.50456From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001013.27941From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
4.33367From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00178552
00178553
00178554
00178555
00178556
00178557
00178558
Ortholog (18)
Paralog (46)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-directed 5'-3' RNA polymerase activity; protein dimerization activity; and sodium channel activity. Predicted to be involved in DNA-templated transcription; lipid metabolic process; and sodium ion transport. Predicted to be located in membrane. Is an ortholog of C. elegans fat-1 and fat-2. In C. elegans, fat-1 is involved in positive regulation of locomotion and unsaturated fatty acid biosynthetic process.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA11676
Corresponding_transcriptPPA11676.1
Other_sequence (111)
Experimental_infoMicroarray_resultsGPL14372_Probes_21548
GPL14372_Probes_21549
GPL14372_Probes_21550
GPL14372_Probes_21551
GPL14372_Probes_21552
GPL14372_Probes_74125
GPL14372_Probes_74126
GPL14372_Probes_74127
GPL14372_Probes_74128
Expression_clusterWBPaper00041207:PP_dauer_down
WBPaper00041606:PP_X.nematophila_regulated
MethodGene