WormBase Tree Display for Gene: WBGene00101452
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| WBGene00101452 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | Sequence_name | PPA11898 | |||||||
| Molecular_name | PPA11898 | ||||||||
| PPA11898.1 | |||||||||
| PP66137 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000068343 | ||||||||
| UMM-S394-4.7 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA11898 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 3 | 04 Jun 2020 14:38:21 | WBPerson1983 | Name_change | CGC_name | Ppa-farl-11 | ||||
| 4 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 14.2023 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 14.2023 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 14.7172 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| 29.9492 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00178659 | ||||||||
| 00178660 | |||||||||
| 00178661 | |||||||||
| 00178662 | |||||||||
| 00178663 | |||||||||
| 00178664 | |||||||||
| 00178665 | |||||||||
| 00178666 | |||||||||
| 00178667 | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00109570 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00116865 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable several functions, including DNA ligase (ATP) activity; purine ribonucleoside triphosphate binding activity; and zinc ion binding activity. Predicted to be involved in DNA biosynthetic process; DNA recombination; and DNA repair. Is an ortholog of C. elegans K07C5.3; Y73B6BL.14; and farl-11. In C. elegans, farl-11 is involved in endoplasmic reticulum organization; epithelial tube morphogenesis; and positive regulation of endocytic recycling. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA11898 | |||||||
| Corresponding_transcript | PPA11898.1 | ||||||||
| Other_sequence (105) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_90288 | |||||||
| GPL14372_Probes_90289 | |||||||||
| Remark | [191001 pad] The CGC name Ppa-farl-11 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210728 pad] The CGC name Ppa-farl-11 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
