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WormBase Tree Display for Gene: WBGene00102094

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Name Class

WBGene00102094SMapS_parentSequencePPA_ChrI
IdentityVersion3
NameSequence_namePPA12540
Molecular_namePPA12540
PPA12540.1
PP53003
Other_nameGENEPREDICTION_SNAP300000069401
UMM-S71-40.39Person_evidenceWBPerson606
Public_namePPA12540
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-ast-1.1
328 Jul 2021 11:12:30WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178930
00178931
00178932
OrthologWBGene00020368Caenorhabditis elegansFrom_analysisInparanoid_8
WBGene00148495Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00125789Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00220335Brugia malayiFrom_analysisWormBase-Compara
WBGene00016798Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00242352Onchocerca volvulusFrom_analysisWormBase-Compara
CSP40.g18905Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Csp5_scaffold_01094.g18346Caenorhabditis sinicaFrom_analysisWormBase-Compara
Pan_g23821Panagrellus redivivusFrom_analysisWormBase-Compara
WBGene00289796Trichuris murisFrom_analysisWormBase-Compara
Paralog (16)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity and sequence-specific DNA binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans ast-1 and ets-8. In C. elegans, ast-1 is involved in several processes, including neuron differentiation; pharynx morphogenesis; and regulation of nematode male tail tip morphogenesis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA12540
Corresponding_transcriptPPA12540.1
Experimental_infoMicroarray_resultsGPL14372_Probes_10507
GPL14372_Probes_10508
GPL14372_Probes_10510
GPL14372_Probes_10511
Remark[210728 pad] The CGC name Ppa-ast-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene