WormBase Tree Display for Gene: WBGene00102159
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WBGene00102159 | SMap | S_parent | Sequence | PPA_ChrI | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | Sequence_name | PPA12605 | |||||||
Molecular_name | PPA12605 | ||||||||
PPA12605.1 | |||||||||
PP62296 | |||||||||
Other_name | GENEPREDICTION_SNAP300000069466 | ||||||||
UMM-S71-36.17 | Person_evidence | WBPerson606 | |||||||
Public_name | PPA12605 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 01 Oct 2019 10:47:49 | WBPerson1983 | Name_change | CGC_name | Ppa-scl-23 | ||||
3 | 27 Nov 2019 12:48:15 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 1.2163 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
3.6489 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (30) | |||||||||
Paralog (29) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Cysteine-rich secretory protein family; Cysteine-rich secretory protein-related; CAP domain; and CAP superfamily. Is an ortholog of C. elegans scl-9. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA12605 | |||||||
Corresponding_transcript | PPA12605.1 | ||||||||
Experimental_info | Microarray_results | GPL14372_Probes_10729 | |||||||
GPL14372_Probes_10730 | |||||||||
GPL14372_Probes_10731 | |||||||||
Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
WBPaper00041606:PP_X.nematophila_regulated | |||||||||
Remark | [191127 pad] The CGC name Ppa-scl-23 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
Method | Gene |