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WormBase Tree Display for Gene: WBGene00102192

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Name Class

WBGene00102192SMapS_parentSequencePPA_ChrI
IdentityVersion5
NameSequence_namePPA12638
Molecular_namePPA12638
PPA12638.1
PP70177
Other_nameGENEPREDICTION_SNAP300000069499
UMM-S71-35.23Person_evidenceWBPerson606
Public_namePPA12638
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
220 Mar 2018 10:26:12WBPerson4025Name_changeCGC_namePpa-efk-1.1
308 Feb 2019 15:42:28WBPerson1983Name_changeCGC_nameRemoved
408 May 2019 10:09:27WBPerson1983Name_changeCGC_namePpa-efk-1.1
528 May 2021 19:05:20WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010113.8116From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.60387From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00178996
00178997
00178998
OrthologOTIPU.nOt.2.0.1.g09190Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09191Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09213Oscheius tipulaeFrom_analysisWormBase-Compara
ParalogWBGene00202683Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00276674Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable ATP binding activity and protein serine/threonine kinase activity.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA12638
Corresponding_transcriptPPA12638.1
Other_sequencePPC15857_1
Experimental_infoMicroarray_resultsGPL14372_Probes_10822
GPL14372_Probes_10824
GPL14372_Probes_10825
Expression_clusterWBPaper00041606:PP_X.nematophila_regulated
Remark[190208 pad] The CGC name Ppa-efk-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210528 pad] The CGC name Ppa-efk-1.1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene