WormBase Tree Display for Gene: WBGene00102391
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| WBGene00102391 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | Ppa-fos-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA12837 | ||||||||
| Molecular_name | PPA12837 | ||||||||
| PPA12837.1 | |||||||||
| PP71826 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000069249 | ||||||||
| UMM-S71-4.56 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-fos-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fos | ||||||||
| RNASeq_FPKM | WBls:0000032 | 2.17869 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 1.58393 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 2.17869 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 2.57309 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00179070 | ||||||||
| 00179071 | |||||||||
| 00179072 | |||||||||
| 00179073 | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and DNA-binding transcription factor activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is an ortholog of C. elegans fos-1. In C. elegans, fos-1 is involved in several processes, including determination of adult lifespan; negative regulation of stress response to copper ion; and regulation of gene expression. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA12837 | |||||||
| Corresponding_transcript | PPA12837.1 | ||||||||
| Other_sequence (14) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_49062 | |||||||
| GPL14372_Probes_49063 | |||||||||
| Method | Gene |
