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WormBase Tree Display for Gene: WBGene00102602

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Name Class

WBGene00102602SMapS_parentSequencePPA_ChrI
IdentityVersion5
NameSequence_namePPA13048
Molecular_namePPA13048
PPA13048.1
PP75718
Other_nameGENEPREDICTION_SNAP300000069894
GENEPREDICTION_SNAP300000069924
GENEPREDICTION_SNAP300000069926
UMM-S2844-2.50Person_evidenceWBPerson606
Public_namePPA13048
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00102632
324 Nov 2017 09:46:49WBPerson4055EventAcquires_mergeWBGene00102634
421 Oct 2019 15:09:47WBPerson4055EventSplit_intoWBGene00305087
521 Oct 2019 15:10:03WBPerson4055EventSplit_intoWBGene00305088
Acquires_mergeWBGene00102632
WBGene00102634
Split_intoWBGene00305087
WBGene00305088
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.2868From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
4.0956From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00179155
00179156
00179157
00179158
OrthologWBGene00031802Caenorhabditis briggsaeFrom_analysisOMA
WBGene00031803Caenorhabditis briggsaeFrom_analysisOMA
WBGene00056825Caenorhabditis remaneiFrom_analysisOMA
WBGene00140979Caenorhabditis brenneriFrom_analysisOMA
WBGene00223242Brugia malayiFrom_analysisWormBase-Compara
WBGene00242085Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00288616Trichuris murisFrom_analysisWormBase-Compara
Paralog (122)
Structured_descriptionAutomated_descriptionPredicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA13048
Corresponding_CDS_historyPPA13048:pp274
Corresponding_transcriptPPA13048.1
Experimental_infoMicroarray_resultsGPL14372_Probes_40433
GPL14372_Probes_40434
GPL14372_Probes_40435
GPL14372_Probes_40436
GPL14372_Probes_40437
Expression_clusterWBPaper00041207:PP_dauer_down
MethodGene