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WormBase Tree Display for Gene: WBGene00103520

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Name Class

WBGene00103520SMapS_parentSequencePPA_ChrI
IdentityVersion2
NameSequence_namePPA13966
Molecular_namePPA13966
PPA13966.1
PP22949
Other_nameGENEPREDICTION_SNAP300000070763
UMA-S71-21.55Person_evidenceWBPerson606
Public_namePPA13966
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
228 Jul 2021 11:12:30WBPerson1983Name_changeCGC_nameRemoved
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:000003244.0552From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010114.6851From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00179426
Ortholog (61)
Paralog (148)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-84 and sqt-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA13966
Corresponding_transcriptPPA13966.1
Other_sequence (96)
Experimental_infoMicroarray_resultsGPL14372_Probes_50202
GPL14372_Probes_50203
Expression_clusterWBPaper00061743:ppa-eud-1(tu1069)_regulated
WBPaper00064862:Ppa-sul-2(tu1069)_4M3_Down
Remark[210728 pad] The CGC name Ppa-sqt-1 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene