WormBase Tree Display for Gene: WBGene00103531
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| WBGene00103531 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | Ppa-bigr-1 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA13977 | ||||||||
| Molecular_name | PPA13977 | ||||||||
| PPA13977.1 | |||||||||
| PP59445 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000070774 | ||||||||
| UMM-S71-20.6 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-bigr-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 04 Apr 2017 17:04:05 | WBPerson2970 | Name_change | CGC_name | Ppa-bigr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bigr | ||||||||
| RNASeq_FPKM | WBls:0000032 | 6.75084 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 10.2256 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 23.9259 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 6.75084 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00274162 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00304473 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: HAD-like superfamily; Phosphoglycolate phosphatase-like, domain 2; HAD superfamily; Haloacid dehalogenase-like hydrolase; HAD hydrolase, subfamily IA; and Predicted HAD-superfamily phosphatase, subfamily IA/Epoxide hydrolase, N-terminal. Is an ortholog of C. elegans bigr-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA13977 | |||||||
| Corresponding_transcript | PPA13977.1 | ||||||||
| Method | Gene |
