WormBase Tree Display for Gene: WBGene00103712

WBGene00103712 SMap: S_parent: Sequence: PPA_ChrIII
  Identity: Version: 6
    Name: CGC_name: Ppa-coq-8 From_analysis: Inferred_from_orthology
      Sequence_name: PPA14158
      Molecular_name: PPA14158
        PPA14158.1
        PP61248
      Other_name: GENEPREDICTION_SNAP300000070955
        UMM-S2864-5.37 Person_evidence: WBPerson606
      Public_name: Ppa-coq-8
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-coq-8
        3 08 Feb 2019 15:42:29 WBPerson1983 Name_change: CGC_name: Removed
        4 08 May 2019 10:09:23 WBPerson1983 Name_change: CGC_name: Ppa-coq-8
        5 28 May 2021 19:05:21 WBPerson1983 Name_change: CGC_name: Removed
        6 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-coq-8
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: coq
    RNASeq_FPKM: WBls:0000032 12.1261 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 11.5434 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        12.1261 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        22.5041 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    Ortholog (33)
    Paralog: WBGene00091803 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096673 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00097772 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00099772 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00103550 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00107950 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00108223 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00113453 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Is predicted to encode a protein with the following domains: ABC1 atypical kinase-like domain; ADCK3-like domain; and Protein kinase-like domain superfamily. Is an ortholog of C. elegans coq-8. In C. elegans, coq-8 is involved in ubiquinone biosynthetic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA14158
    Corresponding_transcript: PPA14158.1
    Other_sequence (21)
  Experimental_info: Microarray_results: GPL14372_Probes_83273
      GPL14372_Probes_83274
      GPL14372_Probes_83275
      GPL14372_Probes_83276
    Expression_cluster: WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Up
      WBPaper00064862:Ppa-sul-2(tu1069)_4M2_Up
      WBPaper00064862:Ppa-sul-2(tu1069)_4M3_Up
      WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Up
      WBPaper00041207:PP_dauer_down
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190208 pad] The CGC name Ppa-coq-8 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
    [210528 pad] The CGC name Ppa-coq-8 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene