WormBase Tree Display for Gene: WBGene00103734

WBGene00103734 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 8
    Name: CGC_name: Ppa-haf-2.2 From_analysis: Inferred_from_orthology
      Sequence_name: PPA14180
      Molecular_name: PPA14180
        PPA14180.1
        PP54344
      Other_name: GENEPREDICTION_SNAP300000070977
        GENEPREDICTION_SNAP300000070978
        UMM-S71-11.3 Person_evidence: WBPerson606
        Ppa-haf-2 From_analysis: Inferred_from_orthology
      Public_name: Ppa-haf-2.2
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 24 Nov 2017 09:46:50 WBPerson4055 Event: Acquires_merge: WBGene00103735
        3 20 Mar 2018 10:26:12 WBPerson4025 Name_change: CGC_name: Ppa-haf-2.2
        4 08 Feb 2019 15:42:26 WBPerson1983 Name_change: CGC_name: Ppa-haf-2
                Other_name: Ppa-haf-2.2
        5 08 May 2019 10:09:27 WBPerson1983 Name_change: CGC_name: Ppa-haf-2.2
                Other_name: Ppa-haf-2
        6 04 Jun 2020 14:38:22 WBPerson1983 Name_change: CGC_name: Removed
        7 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Ppa-haf-2
        8 28 Jul 2021 11:12:29 WBPerson1983 Name_change: CGC_name: Ppa-haf-2.2
                Other_name: Ppa-haf-2
      Acquires_merge: WBGene00103735
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: haf
    RNASeq_FPKM: WBls:0000032 0.930912 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0.676751 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        0.930912 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        1.09934 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00179593
      00179594
      00179595
      00179596
      00179597
    Ortholog: WBGene00001812 Caenorhabditis elegans From_analysis: OMA
      WBGene00033954 Caenorhabditis briggsae From_analysis: OMA
      WBGene00151864 Caenorhabditis brenneri From_analysis: OMA
      WBGene00292432 Trichuris muris From_analysis: WormBase-Compara
    Paralog (42)
    Structured_description: Automated_description: Predicted to enable ABC-type transporter activity; ATP binding activity; and ATP hydrolysis activity. Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Is an ortholog of C. elegans haf-2. In C. elegans, haf-2 is involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA14180
    Corresponding_transcript: PPA14180.1
    Other_sequence (16)
  Experimental_info: Microarray_results: GPL14372_Probes_49441
      GPL14372_Probes_49442
      GPL14372_Probes_49444
      GPL14372_Probes_49446
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041606:PP_X.nematophila_regulated
  Remark: [200603 pad] The CGC name Ppa-haf-2.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene