WormBase Tree Display for Gene: WBGene00103988
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| WBGene00103988 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | Sequence_name | PPA14434 | |||||||
| Molecular_name | PPA14434 | ||||||||
| PPA14434.1 | |||||||||
| PP61557 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000071176 | ||||||||
| GENEPREDICTION_SNAP300000071177 | |||||||||
| GENEPREDICTION_SNAP300000071179 | |||||||||
| GENEPREDICTION_SNAP300000071184 | |||||||||
| UMM-S112-14.28 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA14434 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-met-2 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103989 | ||||
| 4 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103991 | ||||
| 5 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00103996 | ||||
| 6 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00205095 | ||||
| 7 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00103991 | ||||||||
| WBGene00103989 | |||||||||
| WBGene00103996 | |||||||||
| WBGene00205095 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 1.64439 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0.54813 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00179723 | ||||||||
| 00179724 | |||||||||
| 00179725 | |||||||||
| 00179726 | |||||||||
| 00179727 | |||||||||
| 00179728 | |||||||||
| 00179729 | |||||||||
| 00179730 | |||||||||
| Ortholog (11) | |||||||||
| Structured_description | Automated_description | Predicted to enable several functions, including DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity; histone methyltransferase activity; and ion binding activity. Predicted to be involved in DNA topological change. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA14434 | |||||||
| Corresponding_transcript | PPA14434.1 | ||||||||
| Other_sequence (15) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_27082 | |||||||
| GPL14372_Probes_27083 | |||||||||
| GPL14372_Probes_81974 | |||||||||
| GPL14372_Probes_81975 | |||||||||
| GPL14372_Probes_81977 | |||||||||
| GPL14372_Probes_81978 | |||||||||
| GPL14372_Probes_81979 | |||||||||
| GPL14372_Probes_81980 | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-met-2 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00281462 | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
