WormBase Tree Display for Gene: WBGene00104585
expand all nodes | collapse all nodes | view schema
WBGene00104585 | SMap | S_parent | Sequence | PPA_ChrIII | ||
---|---|---|---|---|---|---|
Identity | Version | 8 | ||||
Name | CGC_name | Ppa-unc-32 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA15031 | |||||
Molecular_name | PPA15031 | |||||
PPA15031.1 | ||||||
PP59218 | ||||||
Other_name | GENEPREDICTION_SNAP300000074727 | |||||
GENEPREDICTION_SNAP300000074729 | ||||||
GENEPREDICTION_SNAP300000080876 | ||||||
UMM-S66-29.47 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-unc-32 | |||||
Species | Pristionchus pacificus | |||||
History (2) | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | unc | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 0.45497 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
1.36491 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
GO_annotation | 00179946 | |||||
00179947 | ||||||
00179948 | ||||||
00179949 | ||||||
Ortholog (47) | ||||||
Paralog (5) | ||||||
Structured_description | Automated_description | Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to be involved in proton transmembrane transport. Predicted to be part of vacuolar proton-transporting V-type ATPase, V0 domain. Is an ortholog of C. elegans unc-32. In C. elegans, unc-32 is involved in several processes, including cholinergic synaptic transmission; defense response to Gram-positive bacterium; and positive regulation of neurotransmitter secretion. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA15031 | ||||
Corresponding_transcript | PPA15031.1 | |||||
Other_sequence (88) | ||||||
Experimental_info | Microarray_results | GPL14372_Probes_5745 | ||||
GPL14372_Probes_5746 | ||||||
GPL14372_Probes_46890 | ||||||
GPL14372_Probes_46891 | ||||||
Remark | [190208 pad] The CGC name Ppa-unc-32 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[200204 pad] The CGC name Ppa-unc-32 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |