WormBase Tree Display for Gene: WBGene00105481
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| WBGene00105481 | SMap | S_parent | Sequence | PPA_ChrX | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 6 | |||||||
| Name | Sequence_name | PPA15927 | |||||||
| Molecular_name | PPA15927 | ||||||||
| PPA15927.1 | |||||||||
| PP68599 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000072652 | ||||||||
| GENEPREDICTION_SNAP300000072653 | |||||||||
| UMM-S250-3.90 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA15927 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00105482 | ||||
| 3 | 08 Feb 2019 15:42:27 | WBPerson1983 | Name_change | CGC_name | Ppa-ccr-4.1 | ||||
| 4 | 08 May 2019 10:09:28 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 28 May 2021 19:05:19 | WBPerson1983 | Name_change | CGC_name | Ppa-ccr-4.1 | ||||
| 6 | 28 Jul 2021 11:12:30 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00105482 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 24.0773 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 8.02577 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| GO_annotation | 00180358 | ||||||||
| 00180359 | |||||||||
| 00180360 | |||||||||
| 00180361 | |||||||||
| Ortholog (31) | |||||||||
| Paralog | WBGene00096819 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00118314 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| WBGene00276462 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable catalytic activity and transmembrane signaling receptor activity. Predicted to be involved in sensory perception of chemical stimulus. Predicted to be located in membrane. Is an ortholog of C. elegans angl-1 and ccr-4. In C. elegans, ccr-4 is involved in nuclear-transcribed mRNA poly(A) tail shortening. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA15927 | |||||||
| Corresponding_transcript | PPA15927.1 | ||||||||
| Experimental_info | Microarray_results (11) | ||||||||
| Expression_cluster | WBPaper00041606:PP_X.nematophila_regulated | ||||||||
| Remark | [190507 pad] The CGC name Ppa-ccr-4.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210728 pad] The CGC name Ppa-ccr-4.1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
