WormBase Tree Display for Gene: WBGene00105576
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| WBGene00105576 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | Sequence_name | PPA16022 | |||||||
| Molecular_name | PPA16022 | ||||||||
| PPA16022.1 | |||||||||
| PP67730 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000072436 | ||||||||
| GENEPREDICTION_SNAP300000072437 | |||||||||
| UMM-S576-0.39 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA16022 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:46 | WBPerson2970 | Name_change | CGC_name | Ppa-smg-8 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00105577 | ||||
| 4 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00105577 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 18.9292 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 15.9965 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 18.9292 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 29.0604 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00180402 | ||||||||
| 00180403 | |||||||||
| Ortholog (57) | |||||||||
| Structured_description | Automated_description | Predicted to enable oxidoreductase activity. Predicted to be involved in nuclear-transcribed mRNA catabolic process, nonsense-mediated decay. Is an ortholog of C. elegans Y9C9A.16 and sqrd-1. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA16022 | |||||||
| Corresponding_transcript | PPA16022.1 | ||||||||
| Other_sequence (39) | |||||||||
| Experimental_info | Microarray_results (12) | ||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_up | ||||||||
| WBPaper00041606:PP_X.nematophila_regulated | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-smg-8 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
