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WormBase Tree Display for Gene: WBGene00105582

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Name Class

WBGene00105582SMapS_parentSequencePPA_ChrII
IdentityVersion1
NameCGC_namePpa-rer-1From_analysisInferred_from_orthology
Sequence_namePPA16028
Molecular_namePPA16028
PPA16028.1
PP54887
Other_nameGENEPREDICTION_SNAP300000072442
UMM-S576-0.50Person_evidenceWBPerson606
Public_namePpa-rer-1
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrer
RNASeq_FPKMWBls:000003217.7181From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.8819From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
17.7181From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
20.9275From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00180404
Ortholog (32)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane. Is an ortholog of C. elegans rer-1. In C. elegans, rer-1 is involved in IRE1-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA16028
Corresponding_transcriptPPA16028.1
Other_sequence (47)
Experimental_infoMicroarray_resultsGPL14372_Probes_15925
GPL14372_Probes_15926
GPL14372_Probes_15927
MethodGene