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WormBase Tree Display for Gene: WBGene00105966

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Name Class

WBGene00105966SMapS_parentSequencePPA_ChrIV
IdentityVersion6
NameSequence_namePPA16412
Molecular_namePPA16412
PPA16412.1
PP72643
Other_nameGENEPREDICTION_SNAP300000073122
GENEPREDICTION_SNAP300000073123
UMA-S2840-81.84Person_evidenceWBPerson606
Public_namePPA16412
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00105967
308 Feb 2019 15:42:26WBPerson1983Name_changeCGC_namePpa-col-117
408 May 2019 10:09:28WBPerson1983Name_changeCGC_nameRemoved
528 May 2021 19:05:19WBPerson1983Name_changeCGC_namePpa-col-117
628 Jul 2021 11:12:30WBPerson1983Name_changeCGC_nameRemoved
Acquires_mergeWBGene00105967
StatusLive
Gene_infoBiotypeSO:0001217
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001010From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
RNASeq.pristionchus.total_over_all_stages.control_mean
GO_annotation00180558
OrthologWBGene00000691Caenorhabditis elegansFrom_analysisOMA
WBGene00071278Caenorhabditis remaneiFrom_analysisOMA
WBGene00126870Caenorhabditis japonicaFrom_analysisOMA
WBGene00129488Caenorhabditis japonicaFrom_analysisOMA
WBGene00131084Caenorhabditis japonicaFrom_analysisOMA
WBGene00227669Brugia malayiFrom_analysisWormBase-Compara
WBGene00240733Onchocerca volvulusFrom_analysisWormBase-Compara
CBOVI.g7911Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7914Caenorhabditis bovisFrom_analysisWormBase-Compara
Cang_2012_03_13_12168.g23597Caenorhabditis angariaFrom_analysisWormBase-Compara
Paralog (148)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans col-117.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA16412
Corresponding_transcriptPPA16412.1
Other_sequenceGO251092.1
NB06630
HBC01962_1
AM744004.1
FF681561.1
NBC00861_1
EX911992.1
BXC00345_1
Remark[190507 pad] The CGC name Ppa-col-117 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
[210728 pad] The CGC name Ppa-col-117 was deleted as there was no evidence to support it.Curator_confirmedWBPerson1983
MethodGene