WormBase Tree Display for Gene: WBGene00106334
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| WBGene00106334 | SMap | S_parent | Sequence | PPA_ChrIV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | Ppa-cnnm-1 | Inferred_automatically | from gene merge | |||||
| Sequence_name | PPA16780 | ||||||||
| Molecular_name | PPA16780 | ||||||||
| PPA16780.1 | |||||||||
| PP54275 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000073505 | ||||||||
| GENEPREDICTION_SNAP300000073506 | |||||||||
| UMM-S2847-3.24 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-cnnm-1 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-cnnm-1 | ||||
| 3 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00106335 | ||||
| Acquires_merge | WBGene00106335 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cnnm | ||||||||
| RNASeq_FPKM | WBls:0000032 | 5.06436 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 3.34941 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 4.98386 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00180725 | ||||||||
| 00180726 | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00093459 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| WBGene00278200 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable glucosylceramidase activity. Predicted to be involved in sphingolipid metabolic process. Is an ortholog of C. elegans cnnm-1. In C. elegans, cnnm-1 is involved in several processes, including determination of adult lifespan; magnesium ion homeostasis; and positive regulation of developmental process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA16780 | |||||||
| Corresponding_transcript | PPA16780.1 | ||||||||
| Other_sequence (35) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_23862 | |||||||
| GPL14372_Probes_23863 | |||||||||
| GPL14372_Probes_23865 | |||||||||
| GPL14372_Probes_76522 | |||||||||
| GPL14372_Probes_76523 | |||||||||
| GPL14372_Probes_76525 | |||||||||
| Expression_cluster | WBPaper00041207:PP_dauer_down | ||||||||
| Method | Gene |
