WormBase Tree Display for Gene: WBGene00106668
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| WBGene00106668 | SMap | S_parent | Sequence | PPA_ChrII | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 7 | |||||||
| Name | CGC_name | Ppa-mks-2 | From_analysis | Inferred_from_orthology | |||||
| Sequence_name | PPA17114 | ||||||||
| Molecular_name | PPA17114 | ||||||||
| PPA17114.1 | |||||||||
| PP65957 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000073827 | ||||||||
| GENEPREDICTION_SNAP300000075337 | |||||||||
| UMM-S245-13.11 | Person_evidence | WBPerson606 | |||||||
| Public_name | Ppa-mks-2 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 24 Nov 2017 09:46:50 | WBPerson4055 | Event | Acquires_merge | WBGene00108069 | ||||
| 3 | 20 Mar 2018 10:26:12 | WBPerson4025 | Name_change | CGC_name | Ppa-mks-2 | ||||
| 4 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 5 | 08 May 2019 10:09:26 | WBPerson1983 | Name_change | CGC_name | Ppa-mks-2 | ||||
| 6 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
| 7 | 28 Jul 2021 11:12:29 | WBPerson1983 | Name_change | CGC_name | Ppa-mks-2 | ||||
| Acquires_merge | WBGene00108069 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mks | ||||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 19.6791 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 6.5597 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (29) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: PapD-like superfamily; Major sperm protein (MSP) domain; Immunoglobulin-like fold; Uncharacterised protein family, transmembrane-17; MSP (Major sperm protein) domain; and Predicted membrane protein. Is an ortholog of C. elegans mks-2. In C. elegans, mks-2 is involved in non-motile cilium assembly and protein localization to ciliary transition zone. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA17114 | |||||||
| Corresponding_transcript | PPA17114.1 | ||||||||
| Other_sequence | Tcol_isotig12249 | ||||||||
| Tcol_isotig12248 | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_67853 | |||||||
| GPL14372_Probes_67854 | |||||||||
| GPL14372_Probes_67855 | |||||||||
| GPL14372_Probes_67856 | |||||||||
| Remark | [190208 pad] The CGC name Ppa-mks-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||||
| [210528 pad] The CGC name Ppa-mks-2 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||||||
| Method | Gene |
