WormBase Tree Display for Gene: WBGene00106990

WBGene00106990 SMap: S_parent: Sequence: PPA_ChrI
  Identity: Version: 5
    Name: CGC_name: Ppa-cah-4 From_analysis: Inferred_from_orthology
      Sequence_name: PPA17436
      Molecular_name: PPA17436
        PPA17436.1
        PP67292
      Other_name: GENEPREDICTION_SNAP300000074131
        UMM-S207-17.24 Person_evidence: WBPerson606
        Ppa-cah-4.2 From_analysis: Inferred_from_orthology
      Public_name: Ppa-cah-4
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 08 Feb 2019 15:42:27 WBPerson1983 Name_change: CGC_name: Ppa-cah-4.2
        3 08 May 2019 10:09:28 WBPerson1983 Name_change: CGC_name: Removed
        4 28 May 2021 19:05:19 WBPerson1983 Name_change: CGC_name: Ppa-cah-4.2
        5 28 Jul 2021 11:12:28 WBPerson1983 Name_change: CGC_name: Ppa-cah-4
                Other_name: Ppa-cah-4.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: cah
    RNASeq_FPKM: WBls:0000032 6.46697 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 0 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
            RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
        2.15566 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
    GO_annotation: 00181062
      00181063
    Ortholog (40)
    Paralog: WBGene00106991 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00092933 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00096022 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00101667 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00105674 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277423 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable carbonate dehydratase activity and zinc ion binding activity. Is an ortholog of C. elegans cah-4. In C. elegans, cah-4 is involved in small molecule metabolic process. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA17436
    Corresponding_transcript: PPA17436.1
    Other_sequence: SC00563
      GR977778.1
  Experimental_info: Microarray_results: GPL14372_Probes_20470
      GPL14372_Probes_20471
      GPL14372_Probes_20472
      GPL14372_Probes_20473
      GPL14372_Probes_20474
    Expression_cluster: WBPaper00041606:PP_X.nematophila_regulated
  Remark: [190507 pad] The CGC name Ppa-cah-4.2 was deleted as there was no evidence to support it. Curator_confirmed: WBPerson1983
  Method: Gene