WormBase Tree Display for Gene: WBGene00106997
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| WBGene00106997 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | Sequence_name | PPA17443 | |||||||
| Molecular_name | PPA17443 | ||||||||
| PPA17443.1 | |||||||||
| PP51784 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000074138 | ||||||||
| GENEPREDICTION_SNAP300000084067 | |||||||||
| UMM-S207-17.17 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA17443 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 17 Nov 2017 15:19:42 | WBPerson4055 | Name_change | CGC_name | Ppa-gpcp-1 | ||||
| 3 | 24 Nov 2017 09:46:51 | WBPerson4055 | Event | Acquires_merge | WBGene00116800 | ||||
| 4 | 24 Nov 2017 09:46:52 | WBPerson4055 | Event | Acquires_merge | WBGene00202893 | ||||
| 5 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| Acquires_merge | WBGene00116800 | ||||||||
| WBGene00202893 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||||
| 23.1646 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| 7.72153 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||||||
| Ortholog (45) | |||||||||
| Paralog (16) | |||||||||
| Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Major sperm protein (MSP) domain; MSP (Major sperm protein) domain; PapD-like superfamily; and Immunoglobulin-like fold. Is an ortholog of C. elegans F36D3.4 and F53B6.4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA17443 | |||||||
| Corresponding_transcript | PPA17443.1 | ||||||||
| Other_sequence | BXC01779_1 | ||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_72676 | |||||||
| GPL14372_Probes_72677 | |||||||||
| Expression_cluster | WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Up | ||||||||
| WBPaper00064862:Ppa-sul-2(tu1069)_J4.12_Up | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-gpcp-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
