WormBase Tree Display for Gene: WBGene00106999
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WBGene00106999 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Identity (5) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | kars | |||||
RNASeq_FPKM | WBls:0000032 | 71.8831 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 50.7296 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | |||
71.8831 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | ||||
80.3058 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | ||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
GO_annotation | 00181066 | |||||
00181067 | ||||||
00181068 | ||||||
00181069 | ||||||
00181070 | ||||||
00181071 | ||||||
00181072 | ||||||
00181073 | ||||||
Ortholog (31) | ||||||
Paralog | WBGene00090213 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||
WBGene00094728 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
WBGene00276427 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Predicted to enable ATP binding activity; lysine-tRNA ligase activity; and nucleic acid binding activity. Predicted to be involved in lysyl-tRNA aminoacylation. Predicted to be located in cytoplasm. Is an ortholog of C. elegans kars-1. In C. elegans, kars-1 is involved in several processes, including determination of adult lifespan; positive regulation of nematode larval development; and regulation of brood size. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA17445 | ||||
Corresponding_transcript | PPA17445.1 | |||||
Other_sequence (166) | ||||||
Remark | [190208 pad] The CGC name Ppa-kars-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Ppa-kars-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |