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WormBase Tree Display for Gene: WBGene00107002

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Name Class

WBGene00107002SMapS_parentSequencePPA_ChrI
IdentityVersion1
NameCGC_namePpa-dpy-3From_analysisInferred_from_orthology
Sequence_namePPA17448
Molecular_namePPA17448
PPA17448.1
PP04168
Other_nameGENEPREDICTION_SNAP300000074143
UMS-S139-20.48Person_evidenceWBPerson606
Public_namePpa-dpy-3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
RNASeq_FPKMWBls:00000324.43998From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:00001011.47999From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
RNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00181075
Ortholog (26)
Paralog (148)
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Is an ortholog of C. elegans dpy-3. In C. elegans, dpy-3 is involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA17448
Corresponding_transcriptPPA17448.1
Other_sequence (158)
Experimental_infoExpression_clusterWBPaper00061743:ppa-eud-1(tu1069)_regulated
WBPaper00064862:Ppa-sul-2(tu1069)_4M1_Down
MethodGene