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WormBase Tree Display for Gene: WBGene00107024

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Name Class

WBGene00107024SMapS_parentSequencePPA_ChrI
IdentityVersion3
NameCGC_namePpa-hsp-3From_analysisInferred_from_orthology
Sequence_namePPA17470
Molecular_namePPA17470
PPA17470.1
PP75487
Other_nameGENEPREDICTION_SNAP300000074165
GENEPREDICTION_SNAP300000074166
UMM-S139-19.23Person_evidenceWBPerson606
Public_namePpa-hsp-3
SpeciesPristionchus pacificus
HistoryVersion_change106 Aug 2008 09:05:05WBPerson4055EventImportedfrom NGASP
224 Nov 2017 09:46:50WBPerson4055EventAcquires_mergeWBGene00107025
321 Nov 2019 15:22:35WBPerson4055EventSplit_intoWBGene00305139
Acquires_mergeWBGene00107025
Split_intoWBGene00305139
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhsp
RNASeq_FPKMWBls:00000320From_analysisRNASeq.pristionchus.WBls:0000032.control_mean
RNASeq.pristionchus.WBls:0000032.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
WBls:000010112.4949From_analysisRNASeq.pristionchus.total_over_all_stages.control_mean
0From_analysisRNASeq.pristionchus.total_over_all_stages.control_median
37.4848From_analysisRNASeq.pristionchus.WBls:0000101.control_mean
RNASeq.pristionchus.WBls:0000101.control_median
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
GO_annotation00181091
00181092
00181093
Ortholog (35)
ParalogWBGene00304665Pristionchus pacificusFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in DNA-templated transcription. Is an ortholog of C. elegans hsp-3. In C. elegans, hsp-3 is involved in IRE1-mediated unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSPPA17470
Corresponding_CDS_historyPPA17470:pp274
Corresponding_transcriptPPA17470.1
Other_sequence (42)
Experimental_infoMicroarray_resultsGPL14372_Probes_54747
GPL14372_Probes_54748
GPL14372_Probes_54749
GPL14372_Probes_54750
GPL14372_Probes_54751
MethodGene