WormBase Tree Display for Gene: WBGene00107026
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WBGene00107026 | SMap | S_parent | Sequence | PPA_ChrI | ||
---|---|---|---|---|---|---|
Identity | Version | 7 | ||||
Name | CGC_name | Ppa-suco-1 | From_analysis | Inferred_from_orthology | ||
Sequence_name | PPA17472 | |||||
Molecular_name | PPA17472a | |||||
PPA17472a.1 | ||||||
PP75503 | ||||||
PPA17472b | ||||||
PP75524 | ||||||
PPA17472b.1 | ||||||
Other_name | GENEPREDICTION_SNAP300000074167 | |||||
GENEPREDICTION_SNAP300000074169 | ||||||
UMM-S139-18.33 | Person_evidence | WBPerson606 | ||||
Public_name | Ppa-suco-1 | |||||
Species | Pristionchus pacificus | |||||
History (2) | ||||||
Status | Live | |||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | suco | |||||
RNASeq_FPKM | WBls:0000032 | 0 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | ||
RNASeq.pristionchus.WBls:0000032.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | ||||||
WBls:0000101 | 0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||
RNASeq.pristionchus.WBls:0000101.control_mean | ||||||
RNASeq.pristionchus.WBls:0000101.control_median | ||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | ||||||
RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
Ortholog (29) | ||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Sad1 / UNC-like C-terminal and SUN domain. Is an ortholog of C. elegans suco-1. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | PPA17472a | ||||
PPA17472b | ||||||
Corresponding_CDS_history | PPA17472:pp274 | |||||
Corresponding_transcript | PPA17472a.1 | |||||
PPA17472b.1 | ||||||
Other_sequence | Tcol_isotig00387 | |||||
Tcol_isotig00389 | ||||||
CBC12742_1 | ||||||
HGC11564_1 | ||||||
JI165243.1 | ||||||
HG04626 | ||||||
PEC00294_1 | ||||||
PE00444 | ||||||
Experimental_info | Microarray_results | GPL14372_Probes_54752 | ||||
Remark | [190208 pad] The CGC name Ppa-suco-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | |||
[210528 pad] The CGC name Ppa-suco-1 was deleted as there was no evidence to support it. | Curator_confirmed | WBPerson1983 | ||||
Method | Gene |