WormBase Tree Display for Gene: WBGene00107425
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WBGene00107425 | SMap | S_parent | Sequence | PPA_ChrIII | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 8 | |||||||
Name | CGC_name | Ppa-unc-80 | From_analysis | Inferred_from_orthology | |||||
Sequence_name | PPA17871 | ||||||||
Molecular_name | PPA17871 | ||||||||
PPA17871.1 | |||||||||
PP61829 | |||||||||
Other_name | GENEPREDICTION_SNAP300000074574 | ||||||||
UMM-S2874-3.48 | Person_evidence | WBPerson606 | |||||||
Public_name | Ppa-unc-80 | ||||||||
Species | Pristionchus pacificus | ||||||||
History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
2 | 18 Nov 2010 11:54:47 | WBPerson2970 | Name_change | CGC_name | Ppa-unc-80 | ||||
3 | 18 Nov 2011 16:33:15 | WBPerson2970 | Name_change | CGC_name | Removed | ||||
4 | 20 Mar 2018 10:26:11 | WBPerson4025 | Name_change | CGC_name | Ppa-unc-80 | ||||
5 | 08 Feb 2019 15:42:29 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
6 | 08 May 2019 10:09:24 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-80 | ||||
7 | 28 May 2021 19:05:21 | WBPerson1983 | Name_change | CGC_name | Removed | ||||
8 | 28 Jul 2021 11:12:28 | WBPerson1983 | Name_change | CGC_name | Ppa-unc-80 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
RNASeq_FPKM | WBls:0000032 | 3.26584 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
WBls:0000101 | 1.08861 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
0 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
RNASeq.pristionchus.WBls:0000101.control_mean | |||||||||
RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
Ortholog (43) | |||||||||
Structured_description | Automated_description | Is predicted to encode a protein with the following domains: Armadillo-type fold; Cation channel complex component UNC80, N-terminal; and UNC80 N-terminal. Is an ortholog of C. elegans unc-80. In C. elegans, unc-80 is involved in several processes, including monoatomic cation homeostasis; positive regulation of locomotion; and response to anesthetic. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | PPA17871 | |||||||
Corresponding_transcript | PPA17871.1 | ||||||||
Other_sequence (20) | |||||||||
Experimental_info | Microarray_results | GPL14372_Probes_21166 | |||||||
GPL14372_Probes_73152 | |||||||||
GPL14372_Probes_73153 | |||||||||
Remark (2) | |||||||||
Method | Gene |