WormBase Tree Display for Gene: WBGene00108268

WBGene00108268 SMap: S_parent: Sequence: PPA_ChrX
  Identity: Version: 3
    Name: CGC_name: Ppa-chpf-1 From_analysis: Inferred_from_orthology
      Sequence_name: PPA18714
      Molecular_name: PPA18714
        PPA18714.1
        PP16232
      Other_name: GENEPREDICTION_SNAP300000075528
        UMM-S293-2.2 Person_evidence: WBPerson606
        Ppa-chpf-2 From_analysis: Inferred_from_orthology
      Public_name: Ppa-chpf-1
    Species: Pristionchus pacificus
    History: Version_change: 1 06 Aug 2008 09:05:05 WBPerson4055 Event: Imported: from NGASP
        2 14 Apr 2015 11:01:47 WBPerson2970 Name_change: CGC_name: Ppa-chpf-2
        3 20 Mar 2018 10:26:11 WBPerson4025 Name_change: CGC_name: Ppa-chpf-1
                Other_name: Ppa-chpf-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: chpf
    RNASeq_FPKM: WBls:0000032 32.0143 From_analysis: RNASeq.pristionchus.WBls:0000032.control_mean
            RNASeq.pristionchus.WBls:0000032.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659
      WBls:0000101 32.0143 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_median
        38.4063 From_analysis: RNASeq.pristionchus.total_over_all_stages.control_mean
        83.2047 From_analysis: RNASeq.pristionchus.WBls:0000101.control_mean
            RNASeq.pristionchus.WBls:0000101.control_median
            RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656
    GO_annotation: 00181713
    Ortholog (45)
    Paralog: WBGene00090405 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00091463 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00111670 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00275105 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276075 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00281652 Pristionchus pacificus From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Is an ortholog of C. elegans chpf-1. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: PPA18714
    Corresponding_transcript: PPA18714.1
    Other_sequence (44)
  Experimental_info: Microarray_results: GPL14372_Probes_75448
      GPL14372_Probes_75449
      GPL14372_Probes_75450
      GPL14372_Probes_75451
      GPL14372_Probes_75452
    Expression_cluster: WBPaper00041207:PP_dauer_up
      WBPaper00041606:PP_X.nematophila_regulated
  Method: Gene