WormBase Tree Display for Gene: WBGene00108596
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| WBGene00108596 | SMap | S_parent | Sequence | PPA_ChrI | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | PPA19042 | |||||||
| Molecular_name | PPA19042 | ||||||||
| PPA19042.1 | |||||||||
| PP71561 | |||||||||
| Other_name | GENEPREDICTION_SNAP300000075861 | ||||||||
| UMM-S469-1.50 | Person_evidence | WBPerson606 | |||||||
| Public_name | PPA19042 | ||||||||
| Species | Pristionchus pacificus | ||||||||
| History | Version_change | 1 | 06 Aug 2008 09:05:05 | WBPerson4055 | Event | Imported | from NGASP | ||
| 2 | 18 Nov 2010 11:54:47 | WBPerson2970 | Name_change | CGC_name | Ppa-gana-1 | ||||
| 3 | 20 Mar 2018 10:26:13 | WBPerson4025 | Name_change | CGC_name | Removed | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| RNASeq_FPKM | WBls:0000032 | 18.1205 | From_analysis | RNASeq.pristionchus.WBls:0000032.control_mean | |||||
| RNASeq.pristionchus.WBls:0000032.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000032.Unknown.WBbt:0007833.SRP001700.SRX015659 | |||||||||
| WBls:0000101 | 15.5521 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_mean | ||||||
| 18.1205 | From_analysis | RNASeq.pristionchus.total_over_all_stages.control_median | |||||||
| 28.5359 | From_analysis | RNASeq.pristionchus.WBls:0000101.control_mean | |||||||
| RNASeq.pristionchus.WBls:0000101.control_median | |||||||||
| RNASeq.pristionchus.WBStrain00042002.WBls:0000101.Unknown.WBbt:0007833.SRP001700.SRX015656 | |||||||||
| GO_annotation | 00181890 | ||||||||
| 00181891 | |||||||||
| Ortholog (33) | |||||||||
| Paralog | WBGene00099962 | Pristionchus pacificus | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable hydrolase activity, hydrolyzing O-glycosyl compounds. Predicted to be involved in carbohydrate metabolic process. Is an ortholog of C. elegans gana-1. In C. elegans, gana-1 is involved in glycoside catabolic process. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PPA19042 | |||||||
| Corresponding_transcript | PPA19042.1 | ||||||||
| Other_sequence (28) | |||||||||
| Experimental_info | Microarray_results | GPL14372_Probes_59927 | |||||||
| GPL14372_Probes_83034 | |||||||||
| GPL14372_Probes_83035 | |||||||||
| GPL14372_Probes_83036 | |||||||||
| Remark | [180319 gw3] The CGC name Ppa-gana-1 was deleted as there was no evidence to support it. This name has correctly been assigned to WBGene00099962 | Curator_confirmed | WBPerson4025 | ||||||
| Method | Gene |
